Beta version

Structural analysis and visualization tools
Residue and atomic contact information for helix-helix interface
    Distance-based constraint:  summary report, visualization (using Jmol)
    Voronoi method: visualize the interaction surface and get packing information
Quantitative measures of interaction area
    Total contact area of helix-helix-interfaces
    Intersection area (cylindrical representation of helix pair)
Sequence motif finder (includes Jmol visualization)

PDB ID: 2SQC



STRIDE assignment of secondary structure:

STRIDE reference: Frishman, D. & Argos, P. (1995) Knowledge-based secondary structure assignment.
Proteins: structure, function and genetics, 23, 566-579.




Created by A. Counterman
Yale University
Last modified by A. Counterman 06/2005
For comments please email to helix@bioinfo.mbb.yale.edu