Structural analysis and visualization tools Residue and atomic contact information for helix-helix interface Distance-based constraint: summary report, visualization (using Jmol) Voronoi method: visualize the interaction surface and get packing information Quantitative measures of interaction area Total contact area of helix-helix-interfaces Intersection area (cylindrical representation of helix pair) Sequence motif finder (includes Jmol visualization)
STRIDE assignment of secondary structure:
STRIDE reference: Frishman, D. & Argos, P. (1995) Knowledge-based secondary structure assignment.
Proteins: structure, function and genetics, 23, 566-579.
Created by A. Counterman
Last modified by A. Counterman 06/2005
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