TM Helix- Non TM Helix Interaction

PDB entry: 1Q90

PHOTOSYNTHESIS 22-AUG-03
STRUCTURE OF THE CYTOCHROME B6F (PLASTOHYDROQUINONE :
2 PLASTOCYANIN OXIDOREDUCTASE) FROM CHLAMYDOMONAS REINHARDTI

Interacting TM helices and the interaction interface

(identified by using predictions made with TMHMM.)
Number of transmembrane helices: 0
Note that some helices may be 'split' in the TMHMM analysis and thus not counted.
select 1-9:A color ribbons magenta select 20-25:A color ribbons magenta select 248-290:A color ribbons magenta select 4-13:B color ribbons magenta select 13-24:B color ribbons magenta select 32-55:B color ribbons magenta select 64-75:B color ribbons magenta select 141-158:B color ribbons magenta select 176-189:B color ribbons magenta select 91-99:C color ribbons magenta select 109-113:C color ribbons magenta select 11-21:D color ribbons magenta select 23-27:D color ribbons magenta select 38-58:D color ribbons magenta select 78-91:D color ribbons magenta select 150-155:D color ribbons magenta select 38-69:R color ribbons magenta select 62-94:M color ribbons magenta select 70-96:N color ribbons magenta "> View non transmembrane helices
Helices (red) with interacting helices- no TMs .
Interacting helices withResidues
Helix 1
Helix 2
Helix 4
Helix 5
Helix 6
Helix 7
Helix 8
Helix 11
Helix 13
Helix 15
Helix 16
Helix 17
Helix 18
Helix 19
Helix 20
Helix 23
Helix 24
Helix 27
Helix 28




















Created by Ursula Lehnert
Yale University
Last modified by A. Counterman 08/2007
For comments please email to helix@bioinfo.mbb.yale.edu