TM Helix- Non TM Helix Interaction

PDB entry: 1PF4

LIPID TRANSPORT 23-MAY-03
STRUCTURE OF MSBA FROM VIBRIO CHOLERA: A MULTIDRUG
2 RESISTANCE ABC TRANSPORTER HOMOLOG IN A CLOSED CONFORMATIO

Interacting TM helices and the interaction interface

(identified by using predictions made with TMHMM.)
Number of transmembrane helices: 0
Note that some helices may be 'split' in the TMHMM analysis and thus not counted.
select 14-21:A color ribbons magenta select 92-106:A color ribbons magenta select 111-119:A color ribbons magenta select 124-131:A color ribbons magenta select 167-172:A color ribbons magenta select 240-247:A color ribbons magenta select 279-295:A color ribbons magenta select 299-313:A color ribbons magenta select 380-389:A color ribbons magenta select 432-443:A color ribbons magenta select 451-466:A color ribbons magenta select 468-478:A color ribbons magenta select 484-495:A color ribbons magenta select 514-527:A color ribbons magenta select 539-544:A color ribbons magenta select 14-21:B color ribbons magenta select 92-106:B color ribbons magenta select 111-119:B color ribbons magenta select 124-131:B color ribbons magenta select 167-172:B color ribbons magenta select 240-247:B color ribbons magenta select 279-295:B color ribbons magenta select 299-313:B color ribbons magenta select 380-389:B color ribbons magenta select 432-443:B color ribbons magenta select 451-466:B color ribbons magenta select 468-478:B color ribbons magenta select 484-495:B color ribbons magenta select 514-527:B color ribbons magenta select 539-544:B color ribbons magenta select 14-21:C color ribbons magenta select 92-106:C color ribbons magenta select 111-119:C color ribbons magenta select 124-131:C color ribbons magenta select 167-172:C color ribbons magenta select 240-247:C color ribbons magenta select 279-295:C color ribbons magenta select 299-313:C color ribbons magenta select 380-389:C color ribbons magenta select 432-443:C color ribbons magenta select 451-466:C color ribbons magenta select 468-478:C color ribbons magenta select 484-495:C color ribbons magenta select 514-527:C color ribbons magenta select 539-544:C color ribbons magenta select 14-21:D color ribbons magenta select 92-106:D color ribbons magenta select 111-119:D color ribbons magenta select 124-131:D color ribbons magenta select 167-172:D color ribbons magenta select 240-247:D color ribbons magenta select 279-295:D color ribbons magenta select 299-313:D color ribbons magenta select 380-389:D color ribbons magenta select 432-443:D color ribbons magenta select 451-466:D color ribbons magenta select 468-478:D color ribbons magenta select 484-495:D color ribbons magenta select 514-527:D color ribbons magenta select 539-544:D color ribbons magenta "> View non transmembrane helices
Helices (red) with interacting helices- no TMs .
Interacting helices withResidues
Helix 1
Helix 4
Helix 5
Helix 6
Helix 8
Helix 10
Helix 12
Helix 13
Helix 14
Helix 15
Helix 16
Helix 17
Helix 18
Helix 19
Helix 20
Helix 21
Helix 24
Helix 25
Helix 26
Helix 28
Helix 30
Helix 32
Helix 33
Helix 34
Helix 35
Helix 36
Helix 37
Helix 38
Helix 39
Helix 40
Helix 41
Helix 44
Helix 45
Helix 46
Helix 48
Helix 50
Helix 52
Helix 53
Helix 54
Helix 55
Helix 56
Helix 57
Helix 58
Helix 59
Helix 60
Helix 61
Helix 64
Helix 65
Helix 66
Helix 68
Helix 70
Helix 72
Helix 73
Helix 74
Helix 75
Helix 76
Helix 77
Helix 78
Helix 79
Helix 80





























































Created by Ursula Lehnert
Yale University
Last modified by A. Counterman 08/2007
For comments please email to helix@bioinfo.mbb.yale.edu