TM Helix- Non TM Helix Interaction

PDB entry: 1OCC

OXIDOREDUCTASE (CYTOCHROME(C)-OXYGEN) 18-APR-96
STRUCTURE OF BOVINE HEART CYTOCHROME C OXIDASE AT THE
2 FULLY OXIDIZED STATE

Interacting TM helices and the interaction interface

(identified by using predictions made with TMHMM.)
Number of transmembrane helices: 0
Note that some helices may be 'split' in the TMHMM analysis and thus not counted.
select 2-6:A color ribbons magenta select 51-67:A color ribbons magenta select 70-75:A color ribbons magenta select 77-87:A color ribbons magenta select 178-180:A color ribbons magenta select 222-224:A color ribbons magenta select 288-291:A color ribbons magenta select 361-367:A color ribbons magenta select 371-382:A color ribbons magenta select 488-490:A color ribbons magenta select 492-496:A color ribbons magenta select 125-127:B color ribbons magenta select 166-168:B color ribbons magenta select 216-225:B color ribbons magenta select 41-66:C color ribbons magenta select 110-112:C color ribbons magenta select 8-12:D color ribbons magenta select 35-45:D color ribbons magenta select 48-50:D color ribbons magenta select 53-63:D color ribbons magenta select 68-71:D color ribbons magenta select 109-111:D color ribbons magenta select 113-125:D color ribbons magenta select 135-137:D color ribbons magenta select 8-20:E color ribbons magenta select 26-38:E color ribbons magenta select 45-57:E color ribbons magenta select 61-75:E color ribbons magenta select 79-96:E color ribbons magenta select 101-104:E color ribbons magenta select 9-12:F color ribbons magenta select 15-25:F color ribbons magenta select 13-22:G color ribbons magenta select 18-20:H color ribbons magenta select 26-44:H color ribbons magenta select 54-63:H color ribbons magenta select 66-78:H color ribbons magenta select 40-53:I color ribbons magenta select 56-65:I color ribbons magenta select 5-13:J color ribbons magenta select 37-41:M color ribbons magenta select 2-6:N color ribbons magenta select 51-67:N color ribbons magenta select 70-75:N color ribbons magenta select 77-87:N color ribbons magenta select 178-180:N color ribbons magenta select 222-224:N color ribbons magenta select 288-291:N color ribbons magenta select 361-367:N color ribbons magenta select 371-382:N color ribbons magenta select 488-490:N color ribbons magenta select 492-496:N color ribbons magenta select 125-127:O color ribbons magenta select 166-168:O color ribbons magenta select 216-225:O color ribbons magenta select 41-66:P color ribbons magenta select 110-112:P color ribbons magenta select 156-183:P color ribbons magenta select 191-223:P color ribbons magenta select 8-12:Q color ribbons magenta select 35-45:Q color ribbons magenta select 48-50:Q color ribbons magenta select 77-102:Q color ribbons magenta select 113-125:Q color ribbons magenta select 26-38:R color ribbons magenta select 79-96:R color ribbons magenta select 101-104:R color ribbons magenta select 24-37:T color ribbons magenta select 18-20:U color ribbons magenta select 66-78:U color ribbons magenta select 12-38:V color ribbons magenta select 40-53:V color ribbons magenta select 5-13:W color ribbons magenta select 9-35:X color ribbons magenta "> View non transmembrane helices
Helices (red) with interacting helices- no TMs .
Interacting helices withResidues
Helix 1
Helix 3
Helix 4
Helix 5
Helix 8
Helix 10
Helix 13
Helix 16
Helix 17
Helix 21
Helix 22
Helix 25
Helix 26
Helix 27
Helix 29
Helix 31
Helix 36
Helix 37
Helix 38
Helix 39
Helix 40
Helix 42
Helix 43
Helix 44
Helix 45
Helix 46
Helix 47
Helix 48
Helix 49
Helix 50
Helix 51
Helix 52
Helix 53
Helix 55
Helix 56
Helix 57
Helix 58
Helix 60
Helix 61
Helix 62
Helix 67
Helix 68
Helix 70
Helix 71
Helix 72
Helix 75
Helix 77
Helix 80
Helix 83
Helix 84
Helix 88
Helix 89
Helix 92
Helix 93
Helix 94
Helix 96
Helix 98
Helix 00
Helix 01
Helix 03
Helix 04
Helix 05
Helix 08
Helix 10
Helix 13
Helix 16
Helix 17
Helix 21
Helix 22
Helix 25
Helix 26
Helix 27
Helix 29
Helix 31











































































Created by Ursula Lehnert
Yale University
Last modified by A. Counterman 08/2007
For comments please email to helix@bioinfo.mbb.yale.edu