TM Helix- Non TM Helix Interaction

PDB entry: 1L7V

TRANSPORT PROTEIN/HYDROLASE 18-MAR-02
BACTERIAL ABC TRANSPORTER INVOLVED IN B12 UPTAKE

Interacting TM helices and the interaction interface

(identified by using predictions made with TMHMM.)
Number of transmembrane helices: 0
Note that some helices may be 'split' in the TMHMM analysis and thus not counted.
select 40-44:A color ribbons magenta select 50-55:A color ribbons magenta select 171-180:A color ribbons magenta select 187-207:A color ribbons magenta select 207-217:A color ribbons magenta select 217-224:A color ribbons magenta select 258-267:A color ribbons magenta select 45-55:B color ribbons magenta select 171-180:B color ribbons magenta select 187-205:B color ribbons magenta select 207-217:B color ribbons magenta select 217-224:B color ribbons magenta select 258-267:B color ribbons magenta select 38-48:C color ribbons magenta select 62-74:C color ribbons magenta select 89-98:C color ribbons magenta select 103-114:C color ribbons magenta select 123-145:C color ribbons magenta select 165-182:C color ribbons magenta select 192-200:C color ribbons magenta select 216-231:C color ribbons magenta select 38-48:D color ribbons magenta select 62-74:D color ribbons magenta select 89-98:D color ribbons magenta select 103-114:D color ribbons magenta select 123-145:D color ribbons magenta select 165-182:D color ribbons magenta select 192-200:D color ribbons magenta select 216-231:D color ribbons magenta "> View non transmembrane helices
Helices (red) with interacting helices- no TMs .
Interacting helices withResidues
Helix 2
Helix 3
Helix 8
Helix 9
Helix 10
Helix 11
Helix 13
Helix 17
Helix 22
Helix 23
Helix 24
Helix 25
Helix 27
Helix 30
Helix 31
Helix 32
Helix 33
Helix 34
Helix 35
Helix 36
Helix 37
Helix 38
Helix 39
Helix 40
Helix 41
Helix 42
Helix 43
Helix 44
Helix 45






























Created by Ursula Lehnert
Yale University
Last modified by A. Counterman 08/2007
For comments please email to helix@bioinfo.mbb.yale.edu