TM Helix- Non TM Helix Interaction

PDB entry: 1KPL

MEMBRANE PROTEIN 31-DEC-01
CRYSTAL STRUCTURE OF THE CLC CHLORIDE CHANNEL FROM S.
2 TYPHIMURIUM

Interacting TM helices and the interaction interface

(identified by using predictions made with TMHMM.)
Number of transmembrane helices: 0
Note that some helices may be 'split' in the TMHMM analysis and thus not counted.
select 31-67:A color ribbons magenta select 108-117:A color ribbons magenta select 147-165:A color ribbons magenta select 319-325:A color ribbons magenta select 385-395:A color ribbons magenta select 395-402:A color ribbons magenta select 404-439:A color ribbons magenta select 443-460:A color ribbons magenta select 12-26:B color ribbons magenta select 32-68:B color ribbons magenta select 108-116:B color ribbons magenta select 147-166:B color ribbons magenta select 204-210:B color ribbons magenta select 319-324:B color ribbons magenta select 385-395:B color ribbons magenta select 395-402:B color ribbons magenta select 404-439:B color ribbons magenta select 443-461:B color ribbons magenta select 31-67:C color ribbons magenta select 108-117:C color ribbons magenta select 147-165:C color ribbons magenta select 319-325:C color ribbons magenta select 385-395:C color ribbons magenta select 395-402:C color ribbons magenta select 404-439:C color ribbons magenta select 443-460:C color ribbons magenta select 12-26:D color ribbons magenta select 32-68:D color ribbons magenta select 108-116:D color ribbons magenta select 147-166:D color ribbons magenta select 204-210:D color ribbons magenta select 319-324:D color ribbons magenta select 385-395:D color ribbons magenta select 395-402:D color ribbons magenta select 404-439:D color ribbons magenta select 443-461:D color ribbons magenta "> View non transmembrane helices
Helices (red) with interacting helices- no TMs .
Interacting helices withResidues
Helix 1
Helix 3
Helix 5
Helix 10
Helix 13
Helix 14
Helix 15
Helix 16
Helix 17
Helix 18
Helix 20
Helix 22
Helix 24
Helix 28
Helix 31
Helix 32
Helix 33
Helix 34
Helix 35
Helix 37
Helix 39
Helix 44
Helix 47
Helix 48
Helix 49
Helix 50
Helix 51
Helix 52
Helix 54
Helix 56
Helix 58
Helix 62
Helix 65
Helix 66
Helix 67
Helix 68





































Created by Ursula Lehnert
Yale University
Last modified by A. Counterman 08/2007
For comments please email to helix@bioinfo.mbb.yale.edu