TM Helix- Non TM Helix Interaction

PDB entry: 1KPK

MEMBRANE PROTEIN 31-DEC-01
CRYSTAL STRUCTURE OF THE CLC CHLORIDE CHANNEL FROM E. COLI

Interacting TM helices and the interaction interface

(identified by using predictions made with TMHMM.)
Number of transmembrane helices: 0
Note that some helices may be 'split' in the TMHMM analysis and thus not counted.
select 12-26:A color ribbons magenta select 108-116:A color ribbons magenta select 147-166:A color ribbons magenta select 309-313:A color ribbons magenta select 319-325:A color ribbons magenta select 385-393:A color ribbons magenta select 395-402:A color ribbons magenta select 404-435:A color ribbons magenta select 443-458:A color ribbons magenta select 12-26:B color ribbons magenta select 108-116:B color ribbons magenta select 147-166:B color ribbons magenta select 309-313:B color ribbons magenta select 319-325:B color ribbons magenta select 385-393:B color ribbons magenta select 395-402:B color ribbons magenta select 404-435:B color ribbons magenta select 443-458:B color ribbons magenta select 12-26:C color ribbons magenta select 108-116:C color ribbons magenta select 147-166:C color ribbons magenta select 309-313:C color ribbons magenta select 319-325:C color ribbons magenta select 385-393:C color ribbons magenta select 395-402:C color ribbons magenta select 404-435:C color ribbons magenta select 443-458:C color ribbons magenta select 12-26:D color ribbons magenta select 108-116:D color ribbons magenta select 147-166:D color ribbons magenta select 309-313:D color ribbons magenta select 319-325:D color ribbons magenta select 385-393:D color ribbons magenta select 395-402:D color ribbons magenta select 404-435:D color ribbons magenta select 443-458:D color ribbons magenta select 12-26:E color ribbons magenta select 108-116:E color ribbons magenta select 147-166:E color ribbons magenta select 309-313:E color ribbons magenta select 319-325:E color ribbons magenta select 385-393:E color ribbons magenta select 395-402:E color ribbons magenta select 404-435:E color ribbons magenta select 443-458:E color ribbons magenta select 12-26:F color ribbons magenta select 108-116:F color ribbons magenta select 147-166:F color ribbons magenta select 289-306:F color ribbons magenta select 309-313:F color ribbons magenta select 358-379:F color ribbons magenta select 395-402:F color ribbons magenta "> View non transmembrane helices
Helices (red) with interacting helices- no TMs .
Interacting helices withResidues
Helix 1
Helix 4
Helix 6
Helix 11
Helix 12
Helix 15
Helix 16
Helix 17
Helix 18
Helix 19
Helix 22
Helix 24
Helix 29
Helix 30
Helix 33
Helix 34
Helix 35
Helix 36
Helix 37
Helix 40
Helix 42
Helix 47
Helix 48
Helix 51
Helix 52
Helix 53
Helix 54
Helix 55
Helix 58
Helix 60
Helix 65
Helix 66
Helix 69
Helix 70
Helix 71
Helix 72
Helix 73
Helix 76
Helix 78
Helix 83
Helix 84
Helix 87
Helix 88
Helix 89
Helix 90
Helix 91
Helix 94
Helix 96
Helix 00
Helix 01
Helix 04
Helix 06





















































Created by Ursula Lehnert
Yale University
Last modified by A. Counterman 08/2007
For comments please email to helix@bioinfo.mbb.yale.edu