TM Helix- Non TM Helix Interaction

PDB entry: 1JB0

PHOTOSYNTHESIS 01-JUN-01
CRYSTAL STRUCTURE OF PHOTOSYSTEM I: A PHOTOSYNTHETIC
2 REACTION CENTER AND CORE ANTENNA SYSTEM FROM CYANOBACTERIA

Interacting TM helices and the interaction interface

(identified by using predictions made with TMHMM.)
Number of transmembrane helices: 0
Note that some helices may be 'split' in the TMHMM analysis and thus not counted.
select 35-39:A color ribbons magenta select 45-54:A color ribbons magenta select 57-61:A color ribbons magenta select 99-106:A color ribbons magenta select 122-127:A color ribbons magenta select 142-150:A color ribbons magenta select 186-203:A color ribbons magenta select 203-219:A color ribbons magenta select 219-228:A color ribbons magenta select 240-245:A color ribbons magenta select 245-252:A color ribbons magenta select 271-276:A color ribbons magenta select 324-332:A color ribbons magenta select 343-351:A color ribbons magenta select 421-426:A color ribbons magenta select 484-497:A color ribbons magenta select 568-573:A color ribbons magenta select 638-643:A color ribbons magenta select 645-658:A color ribbons magenta select 658-664:A color ribbons magenta select 669-711:A color ribbons magenta select 8-13:B color ribbons magenta select 17-27:B color ribbons magenta select 29-33:B color ribbons magenta select 96-104:B color ribbons magenta select 118-126:B color ribbons magenta select 163-180:B color ribbons magenta select 196-202:B color ribbons magenta select 210-214:B color ribbons magenta select 221-226:B color ribbons magenta select 228-234:B color ribbons magenta select 299-306:B color ribbons magenta select 316-320:B color ribbons magenta select 324-332:B color ribbons magenta select 403-407:B color ribbons magenta select 409-417:B color ribbons magenta select 451-455:B color ribbons magenta select 460-470:B color ribbons magenta select 472-476:B color ribbons magenta select 486-491:B color ribbons magenta select 499-509:B color ribbons magenta select 555-560:B color ribbons magenta select 568-572:B color ribbons magenta select 612-619:B color ribbons magenta select 621-629:B color ribbons magenta select 629-639:B color ribbons magenta select 649-690:B color ribbons magenta select 693-697:B color ribbons magenta select 14-20:C color ribbons magenta select 43-47:C color ribbons magenta select 51-57:C color ribbons magenta select 19-24:D color ribbons magenta select 60-76:D color ribbons magenta select 118-122:D color ribbons magenta select 124-129:D color ribbons magenta select 61-63:E color ribbons magenta select 1-5:F color ribbons magenta select 11-20:F color ribbons magenta select 29-39:F color ribbons magenta select 56-60:F color ribbons magenta select 63-90:F color ribbons magenta select 95-100:F color ribbons magenta select 102-112:F color ribbons magenta select 115-126:F color ribbons magenta select 132-136:F color ribbons magenta select 1-8:J color ribbons magenta select 58-74:K color ribbons magenta select 9-11:L color ribbons magenta select 19-24:L color ribbons magenta select 24-33:L color ribbons magenta select 42-59:L color ribbons magenta select 59-66:L color ribbons magenta select 141-151:L color ribbons magenta select 10-32:X color ribbons magenta "> View non transmembrane helices
Helices (red) with interacting helices- no TMs .
Interacting helices withResidues
Helix 1
Helix 2
Helix 3
Helix 5
Helix 6
Helix 7
Helix 9
Helix 10
Helix 11
Helix 12
Helix 13
Helix 14
Helix 16
Helix 17
Helix 20
Helix 22
Helix 24
Helix 26
Helix 27
Helix 28
Helix 29
Helix 31
Helix 32
Helix 33
Helix 35
Helix 36
Helix 38
Helix 40
Helix 41
Helix 42
Helix 43
Helix 45
Helix 46
Helix 47
Helix 50
Helix 51
Helix 53
Helix 54
Helix 55
Helix 56
Helix 57
Helix 59
Helix 60
Helix 62
Helix 63
Helix 64
Helix 65
Helix 66
Helix 68
Helix 69
Helix 70
Helix 71
Helix 72
Helix 73
Helix 74
Helix 75
Helix 76
Helix 77
Helix 78
Helix 79
Helix 80
Helix 81
Helix 82
Helix 83
Helix 84
Helix 87
Helix 90
Helix 91
Helix 92
Helix 93
Helix 94
Helix 95
Helix 98
Helix 00











































































Created by Ursula Lehnert
Yale University
Last modified by A. Counterman 08/2007
For comments please email to helix@bioinfo.mbb.yale.edu