TM Helix- Non TM Helix Interaction

PDB entry: 1IZL

PHOTOSYNTHESIS 04-OCT-02
CRYSTAL STRUCTURE OF PHOTOSYSTEM II

Interacting TM helices and the interaction interface

(identified by using predictions made with TMHMM.)
Number of transmembrane helices: 0
Note that some helices may be 'split' in the TMHMM analysis and thus not counted.
select 180-189:A color ribbons magenta select 197-202:A color ribbons magenta select 272-277:A color ribbons magenta select 15-25:B color ribbons magenta select 32-37:B color ribbons magenta select 62-69:B color ribbons magenta select 94-101:B color ribbons magenta select 204-213:B color ribbons magenta select 234-243:B color ribbons magenta select 248-254:B color ribbons magenta select 447-472:B color ribbons magenta select 88-93:C color ribbons magenta select 122-128:C color ribbons magenta select 154-161:C color ribbons magenta select 164-173:C color ribbons magenta select 178-182:C color ribbons magenta select 282-290:C color ribbons magenta select 444-448:C color ribbons magenta select 36-41:D color ribbons magenta select 43-52:D color ribbons magenta select 103-108:D color ribbons magenta select 110-115:D color ribbons magenta select 124-129:D color ribbons magenta select 140-146:D color ribbons magenta select 150-155:D color ribbons magenta select 178-187:D color ribbons magenta select 196-204:D color ribbons magenta select 25-30:E color ribbons magenta select 35-40:E color ribbons magenta select 2U-71:H color ribbons magenta select 11-23:I color ribbons magenta select 41-49:U color ribbons magenta select 22-30:V color ribbons magenta select 41-45:V color ribbons magenta select 71-78:V color ribbons magenta select 111-125:V color ribbons magenta select 180-189:J color ribbons magenta select 197-202:J color ribbons magenta select 272-277:J color ribbons magenta select 62-67:L color ribbons magenta select 94-104:L color ribbons magenta select 204-213:L color ribbons magenta select 234-243:L color ribbons magenta select 248-257:L color ribbons magenta select 447-459:L color ribbons magenta select 464-472:L color ribbons magenta select 47-51:M color ribbons magenta select 88-93:M color ribbons magenta select 111-120:M color ribbons magenta select 154-161:M color ribbons magenta select 164-169:M color ribbons magenta select 282-290:M color ribbons magenta select 36-41:N color ribbons magenta select 43-52:N color ribbons magenta select 103-108:N color ribbons magenta select 110-115:N color ribbons magenta select 124-129:N color ribbons magenta select 140-146:N color ribbons magenta select 150-155:N color ribbons magenta select 178-187:N color ribbons magenta select 196-203:N color ribbons magenta select 25-30:P color ribbons magenta select 35-40:P color ribbons magenta select 26-30:Q color ribbons magenta select 34-39:Q color ribbons magenta select 6U-71:S color ribbons magenta select 6U-31:T color ribbons magenta select 41-49:Z color ribbons magenta "> View non transmembrane helices
Helices (red) with interacting helices- no TMs .
Interacting helices withResidues
Helix 4
Helix 5
Helix 7
Helix 9
Helix 10
Helix 11
Helix 12
Helix 15
Helix 16
Helix 17
Helix 19
Helix 21
Helix 23
Helix 24
Helix 25
Helix 26
Helix 29
Helix 31
Helix 32
Helix 33
Helix 34
Helix 35
Helix 36
Helix 37
Helix 38
Helix 39
Helix 40
Helix 43
Helix 44
Helix 46
Helix 47
Helix 48
Helix 49
Helix 50
Helix 51
Helix 52
Helix 56
Helix 57
Helix 59
Helix 62
Helix 63
Helix 66
Helix 67
Helix 68
Helix 70
Helix 71
Helix 72
Helix 74
Helix 75
Helix 77
Helix 78
Helix 81
Helix 83
Helix 84
Helix 85
Helix 86
Helix 87
Helix 88
Helix 89
Helix 90
Helix 91
Helix 94
Helix 95
Helix 96
Helix 97
Helix 98
Helix 99
Helix 00





































































Created by Ursula Lehnert
Yale University
Last modified by A. Counterman 08/2007
For comments please email to helix@bioinfo.mbb.yale.edu