TM Helix- Non TM Helix Interaction

PDB entry: 1GZM

SIGNALING PROTEIN 24-MAY-02
STRUCTURE OF BOVINE RHODOPSIN IN A TRIGONAL CRYSTAL FORM

Interacting TM helices and the interaction interface

(identified by using predictions made with TMHMM.)
Number of transmembrane helices: 0
Note that some helices may be 'split' in the TMHMM analysis and thus not counted.
select 33-65:A color ribbons magenta select 90-101:A color ribbons magenta select 240-277:A color ribbons magenta select 285-295:A color ribbons magenta select 310-321:A color ribbons magenta select 33-65:B color ribbons magenta select 90-101:B color ribbons magenta select 240-277:B color ribbons magenta select 285-295:B color ribbons magenta select 310-321:B color ribbons magenta "> View non transmembrane helices
Helices (red) with interacting helices- no TMs .
Interacting helices withResidues
Helix 1
Helix 3
Helix 7
Helix 8
Helix 10
Helix 11
Helix 13
Helix 17
Helix 18
Helix 20











Created by Ursula Lehnert
Yale University
Last modified by A. Counterman 08/2007
For comments please email to helix@bioinfo.mbb.yale.edu