TM Helix- Non TM Helix Interaction

PDB entry: 1BGY

ELECTRON TRANSPORT 02-JUN-98
CYTOCHROME BC1 COMPLEX FROM BOVINE

Interacting TM helices and the interaction interface

(identified by using predictions made with TMHMM.)
Number of transmembrane helices: 0
Note that some helices may be 'split' in the TMHMM analysis and thus not counted.
select 4-10:A color ribbons magenta select 51-62:A color ribbons magenta select 74-82:A color ribbons magenta select 103-118:A color ribbons magenta select 124-143:A color ribbons magenta select 145-157:A color ribbons magenta select 162-164:A color ribbons magenta select 173-176:A color ribbons magenta select 179-189:A color ribbons magenta select 205-211:A color ribbons magenta select 224-227:A color ribbons magenta select 265-277:A color ribbons magenta select 287-289:A color ribbons magenta select 293-300:A color ribbons magenta select 331-348:A color ribbons magenta select 351-369:A color ribbons magenta select 372-385:A color ribbons magenta select 392-401:A color ribbons magenta select 404-414:A color ribbons magenta select 434-441:A color ribbons magenta select 55-57:B color ribbons magenta select 65-71:B color ribbons magenta select 82-92:B color ribbons magenta select 113-128:B color ribbons magenta select 134-153:B color ribbons magenta select 155-167:B color ribbons magenta select 180-185:B color ribbons magenta select 188-198:B color ribbons magenta select 201-203:B color ribbons magenta select 213-223:B color ribbons magenta select 267-279:B color ribbons magenta select 294-302:B color ribbons magenta select 333-349:B color ribbons magenta select 354-372:B color ribbons magenta select 375-388:B color ribbons magenta select 395-404:B color ribbons magenta select 407-418:B color ribbons magenta select 5-8:C color ribbons magenta select 10-19:C color ribbons magenta select 59-69:C color ribbons magenta select 106-108:C color ribbons magenta select 157-164:C color ribbons magenta select 272-282:C color ribbons magenta select 315-317:C color ribbons magenta select 365-376:C color ribbons magenta select 23-36:D color ribbons magenta select 58-71:D color ribbons magenta select 73-77:D color ribbons magenta select 98-105:D color ribbons magenta select 113-119:D color ribbons magenta select 123-131:D color ribbons magenta select 179-194:D color ribbons magenta select 198-231:D color ribbons magenta select 16-18:E color ribbons magenta select 29-63:E color ribbons magenta select 66-71:E color ribbons magenta select 13-23:F color ribbons magenta select 25-27:F color ribbons magenta select 33-36:F color ribbons magenta select 41-49:F color ribbons magenta select 52-71:F color ribbons magenta select 77-79:F color ribbons magenta select 83-85:F color ribbons magenta select 89-108:F color ribbons magenta select 20-22:G color ribbons magenta select 29-71:G color ribbons magenta select 16-26:H color ribbons magenta select 28-46:H color ribbons magenta select 54-75:H color ribbons magenta select 5-13:J color ribbons magenta select 17-47:J color ribbons magenta select 52-55:J color ribbons magenta select 16-34:K color ribbons magenta select 4-10:M color ribbons magenta select 45-47:M color ribbons magenta select 51-61:M color ribbons magenta select 74-82:M color ribbons magenta select 103-118:M color ribbons magenta select 124-143:M color ribbons magenta select 145-157:M color ribbons magenta select 162-164:M color ribbons magenta select 171-176:M color ribbons magenta select 179-189:M color ribbons magenta select 205-211:M color ribbons magenta select 224-227:M color ribbons magenta select 265-277:M color ribbons magenta select 287-289:M color ribbons magenta select 293-301:M color ribbons magenta select 331-348:M color ribbons magenta select 351-369:M color ribbons magenta select 372-385:M color ribbons magenta select 392-400:M color ribbons magenta select 404-414:M color ribbons magenta select 434-441:M color ribbons magenta select 55-57:N color ribbons magenta select 65-72:N color ribbons magenta select 82-92:N color ribbons magenta select 113-128:N color ribbons magenta select 134-153:N color ribbons magenta select 155-167:N color ribbons magenta select 183-185:N color ribbons magenta select 188-198:N color ribbons magenta select 201-203:N color ribbons magenta select 213-223:N color ribbons magenta select 267-279:N color ribbons magenta select 294-302:N color ribbons magenta select 330-349:N color ribbons magenta select 354-373:N color ribbons magenta select 375-388:N color ribbons magenta select 395-404:N color ribbons magenta select 407-418:N color ribbons magenta select 430-432:N color ribbons magenta select 5-8:O color ribbons magenta select 10-14:O color ribbons magenta select 29-51:O color ribbons magenta select 59-69:O color ribbons magenta select 76-104:O color ribbons magenta select 106-108:O color ribbons magenta select 110-133:O color ribbons magenta select 137-152:O color ribbons magenta select 157-164:O color ribbons magenta select 172-202:O color ribbons magenta select 224-245:O color ribbons magenta select 272-282:O color ribbons magenta select 287-307:O color ribbons magenta select 315-317:O color ribbons magenta select 319-340:O color ribbons magenta select 345-363:O color ribbons magenta select 365-376:O color ribbons magenta select 23-36:P color ribbons magenta select 73-77:P color ribbons magenta select 113-119:P color ribbons magenta select 198-231:P color ribbons magenta select 66-71:Q color ribbons magenta select 114-116:Q color ribbons magenta select 25-27:R color ribbons magenta select 33-36:R color ribbons magenta select 41-49:R color ribbons magenta select 52-71:R color ribbons magenta select 77-79:R color ribbons magenta select 89-108:R color ribbons magenta select 20-22:S color ribbons magenta select 29-71:S color ribbons magenta select 16-26:T color ribbons magenta select 28-46:T color ribbons magenta select 55-74:T color ribbons magenta select 5-13:V color ribbons magenta select 17-47:V color ribbons magenta select 52-55:V color ribbons magenta select 16-34:W color ribbons magenta "> View non transmembrane helices
Helices (red) with interacting helices- no TMs .
Interacting helices withResidues
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Helix 2
Helix 3
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Helix 33
Helix 34
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Helix 37
Helix 38
Helix 39
Helix 41
Helix 43
Helix 46
Helix 49
Helix 51
Helix 54
Helix 55
Helix 56
Helix 57
Helix 58
Helix 59
Helix 60
Helix 61
Helix 62
Helix 63
Helix 64
Helix 65
Helix 66
Helix 67
Helix 68
Helix 69
Helix 70
Helix 71
Helix 72
Helix 73
Helix 74
Helix 75
Helix 76
Helix 77
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Helix 81
Helix 82
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Helix 90
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Helix 94
Helix 95
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Helix 97
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Helix 99
Helix 00
Helix 01
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Helix 08
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Helix 38
Helix 39
Helix 41
Helix 43
Helix 46
Helix 49
Helix 51
Helix 54
Helix 55
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Helix 62
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Created by Ursula Lehnert
Yale University
Last modified by A. Counterman 08/2007
For comments please email to helix@bioinfo.mbb.yale.edu